Transcript: BEAN1-004 OTTHUMT00000422912.1

Description

brain expressed, associated with NEDD4, 1

Location

Chromosome 16: 66,427,371-66,493,529 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000173370 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
BEAN1-003	OTTHUMT00000422910.1	2160	150aa	OTTHUMP00000250343	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58469	-
BEAN1-002	OTTHUMT00000422908.1	1988	259aa	OTTHUMP00000250341	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54015	Q3B7T3
BEAN1-004	OTTHUMT00000422912.1	1078	208aa	OTTHUMP00000250345	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58470	-
BEAN1-007	OTTHUMT00000422914.1	2929	72aa	OTTHUMP00000250346	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
BEAN1-009	OTTHUMT00000422916.2	644	82aa	OTTHUMP00000259110	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BEAN1-011	OTTHUMT00000474097.2	437	113aa	OTTHUMP00000274849	Non stop decay	-	-
BEAN1-001	OTTHUMT00000422909.2	2469	150aa	OTTHUMP00000250342	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS58469	-
BEAN1-008	OTTHUMT00000422915.1	720	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BEAN1-006	OTTHUMT00000422917.1	449	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
BEAN1-010	OTTHUMT00000422913.2	963	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,078 bps Translation length: 208 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58470

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 10/08/2011)

Alternative symbols

CTD-2258A20.1-004

Other assemblies

This transcript maps to 66,427,371-66,493,529 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000561796

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: BEAN1-004 OTTHUMT00000422912.1

Summary

Transcript-based displays