Transcript: SCN1B-001 OTTHUMT00000461567.2

Description

sodium channel, voltage-gated, type I, beta subunit

Location

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SCN1B-003	OTTHUMT00000461569.2	4537	268aa	OTTHUMP00000269392	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46047	-
SCN1B-001	OTTHUMT00000461567.2	1670	218aa	OTTHUMP00000269390	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12441	Q07699
SCN1B-006	OTTHUMT00000491768.1	1600	218aa	OTTHUMP00000283473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12441	-
SCN1B-007	OTTHUMT00000491769.1	4846	235aa	OTTHUMP00000283474	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SCN1B-005	OTTHUMT00000461570.3	1176	185aa	OTTHUMP00000283475	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SCN1B-002	OTTHUMT00000461568.1	814	147aa	OTTHUMP00000269391	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B4DI92
SCN1B-004	OTTHUMT00000461571.2	3461	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SCN1B-008	OTTHUMT00000491770.1	1430	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,670 bps Translation length: 218 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12441

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 21/06/2016 (Created on 15/06/2012)

Alternative symbols

CTD-2527I21.8-001

Other assemblies

This transcript maps to 35,030,466-35,040,449 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000262631

Curation Method

Manual annotation from Havana