Description
ligase I, DNA, ATP-dependent
Location
Chromosome 19: 48,115,445-48,170,603 reverse strand.
About this transcript
This transcript has 28 exons and is annotated with 24 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000183187 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LIG1-001 | OTTHUMT00000465575.1 | 3384 | 919aa | OTTHUMP00000271137 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12711 | P18858 | |
| LIG1-002 | OTTHUMT00000465580.1 | 3027 | 888aa | OTTHUMP00000271139 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74409 | - | |
| LIG1-014 | OTTHUMT00000465591.2 | 580 | 149aa | OTTHUMP00000271143 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R1G7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIG1-009 | OTTHUMT00000465592.2 | 575 | 145aa | OTTHUMP00000271144 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QY71 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIG1-008 | OTTHUMT00000465594.2 | 377 | 28aa | OTTHUMP00000271145 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIG1-003 | OTTHUMT00000465578.1 | 1735 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LIG1-004 | OTTHUMT00000465579.1 | 4102 | 800aa | OTTHUMP00000271138 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | M0R0Q7 | |
| LIG1-006 | OTTHUMT00000465582.1 | 3957 | 801aa | OTTHUMP00000271140 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LIG1-005 | OTTHUMT00000465587.1 | 1527 | 415aa | OTTHUMP00000271142 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4E135 | |
| LIG1-015 | OTTHUMT00000465583.1 | 792 | 36aa | OTTHUMP00000271141 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LIG1-011 | OTTHUMT00000465590.1 | 570 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LIG1-012 | OTTHUMT00000465589.1 | 531 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LIG1-007 | OTTHUMT00000465581.1 | 2697 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-017 | OTTHUMT00000465585.1 | 792 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-019 | OTTHUMT00000465577.1 | 620 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-013 | OTTHUMT00000465588.1 | 606 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-010 | OTTHUMT00000465593.1 | 602 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-020 | OTTHUMT00000465576.1 | 589 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-018 | OTTHUMT00000465584.1 | 584 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIG1-016 | OTTHUMT00000465586.1 | 565 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
