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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
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Gene: Atg4d OTTMUSG00000063268

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Description

autophagy related 4D, cysteine peptidase

Location

Chromosome 9: 21,265,293-21,277,772 forward strand.

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Atg4d-001	OTTMUST00000154095.2	5951	474aa	OTTMUSP00000079698	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22899
Atg4d-003	OTTMUST00000154101.1	445	100aa	OTTMUSP00000079700	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Atg4d-002	OTTMUST00000154099.1	2123	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Atg4d-004	OTTMUST00000154100.1	1204	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Atg4d-005	OTTMUST00000154102.1	697	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

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Summary

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