Description
splicing factor, arginine/serine-rich 5 (SRp40, HRS)
Location
Chromosome 12: 80,945,585-80,950,503 forward strand.
About this transcript
This transcript has 8 exons and is annotated with 16 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000021161 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Srsf5-004 | OTTMUST00000050126.1 | 1568 | 269aa | OTTMUSP00000023359 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS36484 | O35326 | |
| Srsf5-001 | OTTMUST00000050123.1 | 1491 | 269aa | OTTMUSP00000023357 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS36484 | O35326 | |
| Srsf5-003 | OTTMUST00000050125.1 | 1498 | 270aa | OTTMUSP00000023358 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q9D8S5 | |
| Srsf5-009 | OTTMUST00000050131.1 | 1489 | 270aa | OTTMUSP00000023360 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q9D8S5 | |
| Srsf5-002 | OTTMUST00000050124.1 | 786 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Srsf5-010 | OTTMUST00000050132.2 | 547 | 46aa | OTTMUSP00000065114 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R2G3 | |
| Srsf5-006 | OTTMUST00000050128.2 | 886 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Srsf5-008 | OTTMUST00000050130.1 | 538 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Srsf5-011 | OTTMUST00000050133.1 | 489 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Srsf5-007 | OTTMUST00000050129.1 | 3482 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srsf5-012 | OTTMUST00000050134.1 | 2919 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srsf5-005 | OTTMUST00000050127.1 | 2720 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
