This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
External References
- General identifiers
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Transcript: Aplf-001 OTTMUST00000140846.1

.

Description

aprataxin and PNKP like factor

Location

Chromosome 6: 87,628,424-87,672,147 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000057210 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Aplf-001	OTTMUST00000140846.1	3132	478aa	OTTMUSP00000073697	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20324	-
Aplf-002	OTTMUST00000140848.1	1889	499aa	OTTMUSP00000073699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51839	Q9D842
Aplf-004	OTTMUST00000140847.1	1587	44aa	OTTMUSP00000073698	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW39
Aplf-003	OTTMUST00000140849.1	3588	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Protein summary

.

Protein domains for OTTMUSP00000073697.1

.

Transcript-based displays