Transcript: Tox-001 OTTMUST00000009810.2

Description

thymocyte selection-associated HMG box gene

Location

About this transcript

This transcript has 9 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Tox-001	OTTMUST00000009810.2	3961	526aa	OTTMUSP00000004712	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17953	Q66JW3
Tox-005	OTTMUST00000064719.1	3568	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Tox-003	OTTMUST00000009812.1	773	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Tox-004	OTTMUST00000009813.2	2614	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tox-002	OTTMUST00000009811.2	1959	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 3,961 bps Translation length: 526 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17953

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 13/03/2012 (Created on 25/08/2004)

Alternative symbols

RP23-395P16.1-001

Remarks

4930476I18Rik, A230054A08Rik

Other assemblies

This transcript maps to 6,686,353-6,990,799 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000039987

Curation Method

Manual annotation from Havana