Transcript: Myef2-001 OTTMUST00000036338.3

Description

myelin basic protein expression factor 2, repressor

Location

Chromosome 2: 125,086,568-125,123,626 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000015333 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Myef2-003	OTTMUST00000036340.3	2928	550aa	OTTMUSP00000016329	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50689	A2ATP5
Myef2-001	OTTMUST00000036338.3	2071	591aa	OTTMUSP00000043530	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50691	Q8C854
Myef2-005	OTTMUST00000036342.2	2942	567aa	OTTMUSP00000016331	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2ATP6
Myef2-002	OTTMUST00000036339.5	1631	530aa	OTTMUSP00000043531	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A7UQY4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Myef2-004	OTTMUST00000036341.6	1337	446aa	OTTMUSP00000016330	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6XJA1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Myef2-006	OTTMUST00000081377.1	2837	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Myef2-008	OTTMUST00000081379.1	2333	574aa	OTTMUSP00000043533	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS50690	-
Myef2-007	OTTMUST00000081378.1	3424	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Myef2-009	OTTMUST00000081380.1	1801	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 2,071 bps Translation length: 591 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50691

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 14/02/2006)

Alternative symbols

RP24-221D3.2-001

Other assemblies

This transcript maps to 125,086,568-125,123,626 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000152367

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Myef2-001 OTTMUST00000036338.3

Summary

Transcript-based displays