Transcript: Ptpn22-001 OTTMUST00000053696.2

Description

protein tyrosine phosphatase, non-receptor type 22 (lymphoid)

Location

Chromosome 3: 103,860,277-103,912,247 forward strand.

About this transcript

This transcript has 21 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022455 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ptpn22-001	OTTMUST00000053696.2	2743	802aa	OTTMUSP00000025543	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38577	P29352
Ptpn22-002	OTTMUST00000053697.2	2757	715aa	OTTMUSP00000035950	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9QAS3
Ptpn22-006	OTTMUST00000136163.1	737	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ptpn22-005	OTTMUST00000136166.1	570	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ptpn22-008	OTTMUST00000136165.1	2172	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ptpn22-007	OTTMUST00000136164.1	1833	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ptpn22-003	OTTMUST00000053698.1	649	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ptpn22-004	OTTMUST00000059331.1	558	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 2,743 bps Translation length: 802 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38577

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 13/11/2014 (Created on 17/01/2007)

Alternative symbols

AC124698.5-001

Other assemblies

This transcript maps to 103,860,277-103,912,247 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000029433

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Ptpn22-001 OTTMUST00000053696.2

Summary

Transcript-based displays