Transcript: Zkscan5-001 OTTMUST00000055162.1

Description

zinc finger with KRAB and SCAN domains 5

Location

About this transcript

This transcript has 6 exons and is annotated with 71 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Zkscan5-001	OTTMUST00000055162.1	3794	819aa	OTTMUSP00000026380	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39386	Q9Z1D8
Zkscan5-002	OTTMUST00000055163.1	3469	746aa	OTTMUSP00000026381	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51697	Q6PAK4
Zkscan5-005	OTTMUST00000055166.2	443	148aa	OTTMUSP00000026382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6SSC9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Zkscan5-003	OTTMUST00000055164.2	1227	219aa	OTTMUSP00000038936	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CX87
Zkscan5-004	OTTMUST00000055165.2	622	52aa	OTTMUSP00000038937	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Zkscan5-006	OTTMUST00000055167.1	378	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 3,794 bps Translation length: 819 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39386

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/11/2014 (Created on 06/02/2007)

Alternative symbols

AC127411.2-001

Other assemblies

This transcript maps to 145,204,562-145,221,750 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000085671

Curation Method

Manual annotation from Havana