Transcript: Snrpa-002 OTTMUST00000078920.1

Description

small nuclear ribonucleoprotein polypeptide A

Location

About this transcript

This transcript has 7 exons and is annotated with 14 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Snrpa-001	OTTMUST00000078919.1	1365	287aa	OTTMUSP00000042023	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21014	Q62189
Snrpa-002	OTTMUST00000078920.1	1336	287aa	OTTMUSP00000042024	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21014	Q62189
Snrpa-003	OTTMUST00000078921.1	968	247aa	OTTMUSP00000042025	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z0S6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Snrpa-004	OTTMUST00000078922.1	510	44aa	OTTMUSP00000042026	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Snrpa-006	OTTMUST00000143774.1	1690	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Snrpa-005	OTTMUST00000078923.1	509	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,336 bps Translation length: 287 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21014

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/01/2013 (Created on 07/03/2008)

Alternative symbols

AC157561.10-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 27,187,007-27,196,245 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000122202

Curation Method

Manual annotation from Havana