MouseVega Home
Description

SNF2 histone linker PHD RING helicase

Location
About this transcript

This transcript has 30 exons and is annotated with 45 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Shprh-001OTTMUST00000086593.192711674aaOTTMUSP00000046890
 
Protein coding
CCDS35838Q7TPQ3
Shprh-004OTTMUST00000086596.272251616aaOTTMUSP00000051849
 
Protein coding
CCDS35839-
Shprh-005OTTMUST00000086597.266791646aaOTTMUSP00000051850
 
Protein coding
CCDS70003-
Shprh-002OTTMUST00000086594.141711031aaOTTMUSP00000046891
 
Nonsense mediated decay
--
Shprh-008OTTMUST00000086600.1945218aaOTTMUSP00000046892
 
Nonsense mediated decay
-F7D4T4 CDS 5' incomplete
Shprh-006OTTMUST00000086598.13467No protein-
 
Retained intron
--
Shprh-003OTTMUST00000086595.13028No protein-
 
Retained intron
--
Shprh-007OTTMUST00000086599.12857No protein-
 
Retained intron
--
Statistics

Exons: 30 Transcript length: 9,271 bps Translation length: 1,674 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35838

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 20/02/2009)

Alternative symbols

RP23-119L9.1-001

Other assemblies

This transcript maps to 11,149,430-11,217,595 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays