Transcript: Alox5-001 OTTMUST00000093640.1

Description

arachidonate 5-lipoxygenase

Location

Chromosome 6: 116,410,077-116,461,178 reverse strand.

About this transcript

This transcript has 14 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000036516 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Alox5-001	OTTMUST00000093640.1	2821	674aa	OTTMUSP00000051997	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20452	P48999
Alox5-005	OTTMUST00000093644.1	1929	642aa	OTTMUSP00000051999	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q6H6
Alox5-004	OTTMUST00000093643.2	1854	617aa	OTTMUSP00000051998	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9QA93
Alox5-008	OTTMUST00000140206.1	1787	434aa	OTTMUSP00000073521	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW45
Alox5-006	OTTMUST00000093646.1	659	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Alox5-002	OTTMUST00000093641.1	3576	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Alox5-003	OTTMUST00000093642.1	956	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Alox5-007	OTTMUST00000093645.1	546	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 2,821 bps Translation length: 674 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20452

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/04/2015 (Created on 20/07/2010)

Alternative symbols

RP23-441J16.3-001

Other assemblies

This transcript maps to 116,410,077-116,461,178 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000026795

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Alox5-001 OTTMUST00000093640.1

Summary

Transcript-based displays