Description
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
Location
Chromosome 9: 107,681,500-107,710,475 reverse strand.
About this transcript
This transcript has 18 exons and is annotated with 18 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000050787 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Sema3f-001 | OTTMUST00000128718.3 | 3395 | 754aa | OTTMUSP00000069225 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS23505 | - | |
| Sema3f-012 | OTTMUST00000129015.1 | 2383 | 785aa | OTTMUSP00000069357 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81069 | O88632 | |
| Sema3f-003 | OTTMUST00000129021.1 | 906 | 284aa | OTTMUSP00000069359 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Sema3f-006 | OTTMUST00000129023.2 | 685 | 191aa | OTTMUSP00000069360 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sema3f-004 | OTTMUST00000129024.1 | 443 | 148aa | OTTMUSP00000069361 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Sema3f-010 | OTTMUST00000129017.1 | 2972 | 185aa | OTTMUSP00000069358 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Sema3f-013 | OTTMUST00000129135.1 | 711 | 116aa | OTTMUSP00000069411 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Sema3f-002 | OTTMUST00000129020.1 | 1034 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Sema3f-008 | OTTMUST00000129016.1 | 1084 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sema3f-011 | OTTMUST00000129018.1 | 695 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sema3f-007 | OTTMUST00000129022.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sema3f-009 | OTTMUST00000129019.1 | 376 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
