Transcript: Fxr1-005 OTTMUST00000131099.1

Description

fragile X mental retardation gene 1, autosomal homolog

Location

Chromosome 3: 34,020,105-34,069,345 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000052173 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Fxr1-001	OTTMUST00000131101.2	3014	539aa	OTTMUSP00000070170	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50890	-
Fxr1-009	OTTMUST00000131174.2	2459	677aa	OTTMUSP00000070202	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50891	Q61584
Fxr1-002	OTTMUST00000131100.2	2129	621aa	OTTMUSP00000070169	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79896	-
Fxr1-005	OTTMUST00000131099.1	2127	568aa	OTTMUSP00000070168	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JEP0
Fxr1-003	OTTMUST00000131097.2	1986	454aa	OTTMUSP00000070166	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0H2UH27
Fxr1-010	OTTMUST00000131177.1	646	133aa	OTTMUSP00000070204	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JGL6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Fxr1-007	OTTMUST00000131175.1	2158	54aa	OTTMUSP00000070203	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JGH0
Fxr1-006	OTTMUST00000131102.1	2484	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Fxr1-008	OTTMUST00000131176.1	651	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,127 bps Translation length: 568 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/08/2014 (Created on 31/07/2014)

Alternative symbols

RP23-418O21.2-005

Annotation Attributes

retained intron CDS [Definitions]

Other assemblies

This transcript maps to 34,020,105-34,069,345 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000198051

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Fxr1-005 OTTMUST00000131099.1

Summary

Transcript-based displays