Transcript: Nod1-002 OTTMUST00000141867.1

Description

nucleotide-binding oligomerization domain containing 1

Location

About this transcript

This transcript has 12 exons and is annotated with 28 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Nod1-001	OTTMUST00000141868.1	4315	953aa	OTTMUSP00000074070	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20160	Q8BHB0
Nod1-002	OTTMUST00000141867.1	4064	953aa	OTTMUSP00000074069	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20160	Q8BHB0
Nod1-006	OTTMUST00000141870.2	773	257aa	OTTMUSP00000074071	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVI7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Nod1-003	OTTMUST00000141872.2	574	52aa	OTTMUSP00000074072	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SV93	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Nod1-004	OTTMUST00000141869.1	546	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Nod1-005	OTTMUST00000141871.1	396	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 12 Transcript length: 4,064 bps Translation length: 953 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20160

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/05/2015 (Created on 22/05/2015)

Alternative symbols

RP23-258N2.4-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 54,923,949-54,971,661 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000168172

Curation Method

Manual annotation from Havana