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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

Location
About this transcript

This transcript has 7 exons and is annotated with 19 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Smarca2-001OTTMUST00000104062.359211583aaOTTMUSP00000058197
 
Protein coding
CCDS29720F2Z4A9
Smarca2-022OTTMUST00000145589.21846236aaOTTMUSP00000075843
 
Protein coding
CCDS37945Q9D007
Smarca2-016OTTMUST00000104080.31054236aaOTTMUSP00000058208
 
Protein coding
CCDS37945Q9D007
Smarca2-003OTTMUST00000104061.158621601aaOTTMUSP00000058196
 
Protein coding
-H3BLH0
Smarca2-005OTTMUST00000104064.357031525aaOTTMUSP00000058199
 
Protein coding
-H3BJK2
Smarca2-023OTTMUST00000145590.12333278aaOTTMUSP00000075844
 
Protein coding
-A0A140LHP6
Smarca2-009OTTMUST00000104074.31841276aaOTTMUSP00000058205
 
Protein coding
-H3BK47
Smarca2-025OTTMUST00000145610.21140260aaOTTMUSP00000075858
 
Protein coding
-A0A140LIM0
Smarca2-034OTTMUST00000145605.1983276aaOTTMUSP00000075853
 
Protein coding
-H3BK47
Smarca2-011OTTMUST00000104073.2955254aaOTTMUSP00000058204
 
Protein coding
-H3BKJ3
Smarca2-010OTTMUST00000104079.3946254aaOTTMUSP00000058207
 
Protein coding
-H3BKJ3
Smarca2-015OTTMUST00000104081.2898296aaOTTMUSP00000058209
 
Protein coding
-A0A140LHF4 CDS 3' incomplete
Smarca2-033OTTMUST00000145603.1834228aaOTTMUSP00000075851
 
Protein coding
-A0A140LHE2 CDS 3' incomplete
Smarca2-043OTTMUST00000146395.1800267aaOTTMUSP00000076216
 
Protein coding
-A0A140LID0 CDS 5' and 3' incomplete
Smarca2-039OTTMUST00000145613.1779211aaOTTMUSP00000075860
 
Protein coding
-H3BLI4 CDS 3' incomplete
Smarca2-032OTTMUST00000145602.1756200aaOTTMUSP00000075850
 
Protein coding
-A0A140LHZ8 CDS 3' incomplete
Smarca2-031OTTMUST00000145601.1745170aaOTTMUSP00000075849
 
Protein coding
--CDS 3' incomplete
Smarca2-045OTTMUST00000146458.1740244aaOTTMUSP00000076251
 
Protein coding
-A0A140LI14 CDS 3' incomplete
Smarca2-044OTTMUST00000146454.1712229aaOTTMUSP00000076248
 
Protein coding
-A0A140LIQ9 CDS 3' incomplete
Smarca2-035OTTMUST00000145606.1709201aaOTTMUSP00000075854
 
Protein coding
-H3BJI1 CDS 3' incomplete
Smarca2-017OTTMUST00000104082.3692149aaOTTMUSP00000058210
 
Protein coding
--CDS 3' incomplete
Smarca2-042OTTMUST00000146394.1683228aaOTTMUSP00000076215
 
Protein coding
-A0A140LJD7 CDS 5' and 3' incomplete
Smarca2-012OTTMUST00000104075.2645173aaOTTMUSP00000058206
 
Protein coding
-H3BKD2 CDS 3' incomplete
Smarca2-037OTTMUST00000145608.164068aaOTTMUSP00000075856
 
Protein coding
-A0A140LHJ8 CDS 3' incomplete
Smarca2-036OTTMUST00000145607.1630169aaOTTMUSP00000075855
 
Protein coding
--CDS 3' incomplete
Smarca2-027OTTMUST00000145597.142178aaOTTMUSP00000075848
 
Protein coding
-A0A140LIK7 CDS 3' incomplete
Smarca2-002OTTMUST00000104063.159131510aaOTTMUSP00000058198
 
Nonsense mediated decay
-E9QAB8
Smarca2-006OTTMUST00000104067.22018299aaOTTMUSP00000058201
 
Nonsense mediated decay
-H3BKN5 CDS 5' incomplete
Smarca2-007OTTMUST00000104066.3191472aaOTTMUSP00000058200
 
Nonsense mediated decay
-Q9D007
Smarca2-024OTTMUST00000145604.1112272aaOTTMUSP00000075852
 
Nonsense mediated decay
--
Smarca2-038OTTMUST00000145609.175745aaOTTMUSP00000075857
 
Nonsense mediated decay
--
Smarca2-041OTTMUST00000145620.150393aaOTTMUSP00000075865
 
Nonsense mediated decay
--CDS 5' incomplete
Smarca2-004OTTMUST00000104065.11584No protein-
 
Processed transcript
--
Smarca2-018OTTMUST00000104083.1968No protein-
 
Processed transcript
--
Smarca2-028OTTMUST00000145598.1876No protein-
 
Processed transcript
--
Smarca2-014OTTMUST00000104077.2736No protein-
 
Processed transcript
--
Smarca2-029OTTMUST00000145599.1681No protein-
 
Processed transcript
--
Smarca2-040OTTMUST00000145619.1613No protein-
 
Processed transcript
--
Smarca2-030OTTMUST00000145600.1576No protein-
 
Processed transcript
--
Smarca2-008OTTMUST00000104069.1426No protein-
 
Processed transcript
--
Smarca2-020OTTMUST00000145555.12838No protein-
 
Retained intron
--
Smarca2-026OTTMUST00000145611.11924No protein-
 
Retained intron
--
Smarca2-021OTTMUST00000145556.11133No protein-
 
Retained intron
--
Smarca2-019OTTMUST00000104078.1867No protein-
 
Retained intron
--
Smarca2-013OTTMUST00000104076.1661No protein-
 
Retained intron
--
Statistics

Exons: 7 Transcript length: 1,140 bps Translation length: 260 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 04/09/2015 (Created on 03/09/2015)

Alternative symbols

RP23-187N14.1-025

Annotation Attributes

not organism-supported [Definitions]

Remarks

CAGE supported TSS

Other assemblies

This transcript maps to 26,750,318-26,777,381 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays