Transcript: Nlrx1-001 OTTMUST00000153956.2

Description

NLR family member X1

Location

About this transcript

This transcript has 10 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Nlrx1-001	OTTMUST00000153956.2	3669	975aa	OTTMUSP00000079632	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-003	OTTMUST00000153957.1	3621	975aa	OTTMUSP00000079633	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-004	OTTMUST00000153958.1	3579	975aa	OTTMUSP00000079634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-006	OTTMUST00000153961.1	775	155aa	OTTMUSP00000079636	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Nlrx1-007	OTTMUST00000153960.1	678	172aa	OTTMUSP00000079635	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Nlrx1-005	OTTMUST00000153955.1	886	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
Nlrx1-002	OTTMUST00000153959.1	3549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 10 Transcript length: 3,669 bps Translation length: 975 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23100

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 23/06/2016 (Created on 22/06/2016)

Alternative symbols

RP23-162P10.6-001

Other assemblies

This transcript maps to 44,252,717-44,268,491 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000034621

Curation Method

Manual annotation from Havana