Transcript: Pafah1b2-001 OTTMUST00000154939.1

Description

platelet-activating factor acetylhydrolase, isoform 1b, subunit 2

Location

Chromosome 9: 45,962,859-45,985,051 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000063626 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Pafah1b2-001	OTTMUST00000154939.1	6873	229aa	OTTMUSP00000080034	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23139
Pafah1b2-004	OTTMUST00000154940.1	794	229aa	OTTMUSP00000080035	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23139
Pafah1b2-007	OTTMUST00000154941.1	714	197aa	OTTMUSP00000080036	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-009	OTTMUST00000154943.1	456	97aa	OTTMUSP00000080038	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-006	OTTMUST00000154942.1	453	107aa	OTTMUSP00000080037	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-003	OTTMUST00000154944.1	440	88aa	OTTMUSP00000080039	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-005	OTTMUST00000154946.1	386	22aa	OTTMUSP00000080041	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-008	OTTMUST00000154945.1	368	78aa	OTTMUSP00000080040	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pafah1b2-002	OTTMUST00000154947.1	1258	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 6 Transcript length: 6,873 bps Translation length: 229 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23139

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/07/2016 (Created on 21/07/2016)

Alternative symbols

RP23-228B2.6-001

Other assemblies

This transcript maps to 45,962,859-45,985,051 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000172450

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pafah1b2-001 OTTMUST00000154939.1

Summary

Transcript-based displays