Transcript: Kmt2a-007 OTTMUST00000154963.1

Description

lysine (K)-specific methyltransferase 2A

Location

Chromosome 9: 44,803,355-44,881,296 reverse strand.

About this transcript

This transcript has 36 exons and is annotated with 81 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000021055 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Kmt2a-007	OTTMUST00000154963.1	16461	3963aa	OTTMUSP00000080044	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40603	-
Kmt2a-001	OTTMUST00000049805.2	16470	3966aa	OTTMUSP00000023134	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	P55200
Kmt2a-002	OTTMUST00000049806.8	4336	1438aa	OTTMUSP00000023135	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z5H5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Kmt2a-006	OTTMUST00000154370.1	521	173aa	OTTMUSP00000079819	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Kmt2a-005	OTTMUST00000116757.1	5429	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Kmt2a-003	OTTMUST00000049807.2	4081	629aa	OTTMUSP00000065137	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R2S5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Kmt2a-004	OTTMUST00000049808.2	2146	639aa	OTTMUSP00000065136	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R199	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 36 Transcript length: 16,461 bps Translation length: 3,963 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40603

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/07/2016 (Created on 22/07/2016)

Alternative symbols

RP23-444K20.2-007

Annotation Attributes

inferred exon combination [Definitions]

RNA-Seq supported only

Other assemblies

This transcript maps to 44,803,355-44,881,296 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000002095

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Kmt2a-007 OTTMUST00000154963.1

Summary

Transcript-based displays