This is an archived version of Vega. Click here for more information.

Rat

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (19)
- Orthologues (21)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence

Configure this page

Share this page

Bookmark this page

.

Gene: Rn50_20_0061.1 OTTRNOG00000001667

.

Description

class II histocompatibility antigen, M alpha chain-like

Location

Chromosome 20: 3,935,529-3,938,915 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 21 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
Rn50_20_0061.1-001	OTTRNOT00000002638.1	1071	260aa	OTTRNOP00000001525	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
Rn50_20_0061.1-002	OTTRNOT00000002639.1	774	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron
Rn50_20_0061.1-003	OTTRNOT00000002640.1	522	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron

.

Summary

.

.

Gene-based displays