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Havana Rat update genes (21 October 2014)

Gene NameBiotypeVega IDChromosomeLocationModified dateNew / Updated
Ctdsp1protein_codingOTTRNOG00000001511981437307-814425282014-10-08new
Slc11a1protein_codingOTTRNOG00000001510981420635-814313492014-10-08new
Rn50_9_0815.1protein_codingOTTRNOG00000001509981409369-814169222014-10-08new
Gpbar1protein_codingOTTRNOG00000001508981326152-813271412014-10-08new
Aampprotein_codingOTTRNOG00000001507981327389-813331892014-10-08new
Pnkdprotein_codingOTTRNOG00000001506981332621-814007242014-10-08new
Tmbim1protein_codingOTTRNOG00000001505981335836-813531002014-10-08new
Rufy4protein_codingOTTRNOG00000001504981167836-811874812014-10-07new
Rn50_9_0812.2processed_transcriptOTTRNOG00000001503981164828-811664462014-10-07new
Arpc2protein_codingOTTRNOG00000001501981285079-813158392014-10-07new
Cxcr1protein_codingOTTRNOG00000001500981232109-812348702014-10-07new
Cxcr2protein_codingOTTRNOG00000001499981193442-811998142014-10-07new
Olr1711-psunprocessed_pseudogeneOTTRNOG00000001498201213581-12144932014-09-04new
Rn50_20_0044.3processed_pseudogeneOTTRNOG00000001497204570420-45721992014-08-21new
Rn50_20_0045.5unprocessed_pseudogeneOTTRNOG00000001496204386705-43879862014-08-21new
Rn50_20_0045.4unprocessed_pseudogeneOTTRNOG00000001495204419682-44213612014-08-21new
Ppid-ps1processed_pseudogeneOTTRNOG00000001494204474596-44747192014-08-21new
RT1-M1-1-psunprocessed_pseudogeneOTTRNOG00000001493204466302-44679372014-08-21new
Rn50_20_0045.3unprocessed_pseudogeneOTTRNOG00000001492204438940-44408422014-08-21new
RT1-M10-2-psunprocessed_pseudogeneOTTRNOG00000001491204491544-44932032014-08-15new
3082ex4-5processed_pseudogeneOTTRNOG00000001490204523747-45240592014-08-15new
Rn50_20_0046.4processed_transcriptOTTRNOG00000001489204521748-45225562014-08-15new
Rn50_20_0046.5processed_transcriptOTTRNOG00000001488204518994-45196312014-08-15new
Rn50_20_0046.3unprocessed_pseudogeneOTTRNOG00000001487204514530-45161282014-08-15new
Trim39protein_codingOTTRNOG00000001486204530741-45445982014-08-14new
Rpp21protein_codingOTTRNOG00000001485204545572-45475502014-08-14new
Rn50_20_0044.1processed_pseudogeneOTTRNOG00000001484204362327-43627612014-08-15new
3281a3processed_pseudogeneOTTRNOG00000001483204328608-43287162014-08-11new
3298a3processed_pseudogeneOTTRNOG00000001482204311348-43116722014-08-11new
RT1-M10-3-psunprocessed_pseudogeneOTTRNOG00000001481204322079-43236972014-08-11new
RT1-M10-4-psunprocessed_pseudogeneOTTRNOG00000001480204299571-43017592014-08-21new
Trim26protein_codingOTTRNOG00000001479204238439-42487512014-08-08new
Rn50_20_0043.5protein_codingOTTRNOG00000001478204231465-42384242014-08-07new
Pbp-psprocessed_pseudogeneOTTRNOG00000001477204219131-42193602014-08-07new
Rn50_20_0043.4processed_transcriptOTTRNOG00000001476204215480-42160512014-08-07new
Trim10protein_codingOTTRNOG00000001475204219698-42283962014-08-07new
Trim40protein_codingOTTRNOG00000001474204206534-42153592014-08-11new
Trim31protein_codingOTTRNOG00000001473204183589-41967722014-08-07new
Rn50_20_0042.7processed_transcriptOTTRNOG00000001472204145979-41519712014-08-07new
RT1-M6-1protein_codingOTTRNOG00000001471204098575-41003982014-08-07new
Znrd1protein_codingOTTRNOG00000001470204125247-41291502014-08-07new
Ppp1r11protein_codingOTTRNOG00000001469204131645-41351472014-08-07new
Rnf39protein_codingOTTRNOG00000001468204135089-41405782014-08-07new
Znrd1as1protein_codingOTTRNOG00000001467204114400-41251032014-08-11new
RT1-M6-2protein_codingOTTRNOG00000001466204113911-41185992014-08-11new
RT1-M5protein_codingOTTRNOG00000001465204078537-40804592014-08-07new
Mogprotein_codingOTTRNOG00000001464204044677-40549112014-08-04new
Rn50_20_0041.3processed_transcriptOTTRNOG00000001463204060934-40663922014-08-04new
Zfp57protein_codingOTTRNOG00000001462204054795-40611622014-08-04new
Rn50_20_0041.1processed_transcriptOTTRNOG00000001461204021235-40237722014-08-04new
Gabbr1protein_codingOTTRNOG00000001460203996348-40254882014-08-04new
Olr1750protein_codingOTTRNOG00000001459203985790-39868332014-08-01new
Olr1749protein_codingOTTRNOG00000001458203977729-39786672014-08-01new
Rn50_20_0040.8unprocessed_pseudogeneOTTRNOG00000001457203972187-39731472014-08-01new
Olr1747-psunprocessed_pseudogeneOTTRNOG00000001456203946976-39479152014-07-31new
Olr1746protein_codingOTTRNOG00000001455203931254-39321742014-07-31new
Rn50_20_0040.5processed_pseudogeneOTTRNOG00000001454203940291-39408012014-07-31new
Ubdprotein_codingOTTRNOG00000001452203917775-39405902014-07-31new
Olfr94-ps1unprocessed_pseudogeneOTTRNOG00000001451203915984-39169232014-07-31new
Olr1744protein_codingOTTRNOG00000001450203902874-39038512014-07-31new
Olr1743protein_codingOTTRNOG00000001449203886816-38877582014-07-31new
RT1-M3-2-psprocessed_pseudogeneOTTRNOG00000001448203874298-38750632014-07-31new
Olr1741-psprocessed_pseudogeneOTTRNOG00000001447203871255-38719542014-07-31new
Olr1740-psunprocessed_pseudogeneOTTRNOG00000001446203867666-38685872014-07-31new
Olr1742protein_codingOTTRNOG00000001445203879754-38807932014-07-31new
Olr1739protein_codingOTTRNOG00000001444203851165-38522032014-07-31new
Olr1738protein_codingOTTRNOG00000001443203831350-38325002014-07-31new
Olr1737protein_codingOTTRNOG00000001442203825496-38264222014-07-31new
Olr1736protein_codingOTTRNOG00000001441203808535-38097612014-07-31new
Olr1735protein_codingOTTRNOG00000001440203793457-37943832014-07-31new
Olr1734protein_codingOTTRNOG00000001439203780120-37811052014-07-31new
Rn50_20_0038.3unprocessed_pseudogeneOTTRNOG00000001438203737724-37386512014-08-07new
Olr1732-psprocessed_pseudogeneOTTRNOG00000001437203734927-37363192014-07-28new
Rn50_20_0038.2processed_pseudogeneOTTRNOG00000001436203722038-37236102014-07-28new
Rn50_20_0038.1unprocessed_pseudogeneOTTRNOG00000001435203710289-37112162014-07-28new
RT1-M3-1protein_codingOTTRNOG00000001434203856748-38608872014-07-25new
Olr1730protein_codingOTTRNOG00000001433203692428-36934362014-07-25new
Rn50_20_0009.6unprocessed_pseudogeneOTTRNOG00000001432203667296-36682382014-07-25new
Rn50_20_0009.7unprocessed_pseudogeneOTTRNOG00000001431203657527-36584602014-07-25new
Rn50_20_0009.5unprocessed_pseudogeneOTTRNOG00000001430203646385-36473212014-07-25new
Rn50_20_0013.2unprocessed_pseudogeneOTTRNOG00000001429203622611-36235502014-07-25new
Rn50_20_0009.4unprocessed_pseudogeneOTTRNOG00000001428203591848-35927872014-07-25new
Rn50_20_0009.3unprocessed_pseudogeneOTTRNOG00000001427203559402-35603412014-07-25new
Rn50_20_0009.2unprocessed_pseudogeneOTTRNOG00000001426203548706-35496382014-07-25new
Olr1712-psunprocessed_pseudogeneOTTRNOG00000001425201221731-12226482014-09-04new
Rn50_20_0013.1unprocessed_pseudogeneOTTRNOG00000001424201293520-12945192014-07-24new
Rn50_20_0014.2processed_pseudogeneOTTRNOG00000001423201325962-13274712014-07-23new
Olr1868protein_codingOTTRNOG00000001422201316209-13171752014-07-23new
RT1-M2protein_codingOTTRNOG00000001421201328556-13308952014-07-23new
Rn50_1_2856.2processed_transcriptOTTRNOG000000014191285538932-2855545972014-07-18new
Fam160b1protein_codingOTTRNOG000000014181285574325-2855976922014-07-18new
Ablim1protein_codingOTTRNOG000000014171285233693-2854208012014-07-21new
Afap1l2protein_codingOTTRNOG000000014161285110704-2852063522014-07-18new
Rn50_18_0774.2TECOTTRNOG000000014151877376844-773779012014-07-17new
Rn50_18_0774.1processed_transcriptOTTRNOG000000014141877371889-773759882014-07-17new
Rn50_4_0539.1processed_pseudogeneOTTRNOG00000001413453872120-538722882014-07-16new
Rn50_4_0553.2processed_pseudogeneOTTRNOG00000001412455281865-552822732014-07-16new
Zfp800protein_codingOTTRNOG00000001411455222439-552690162014-07-16new
Grm8protein_codingOTTRNOG00000001410454228545-551509552014-07-16new
Sox5protein_codingOTTRNOG000000014094242270193-2426415012014-07-15new
Cntnap2processed_transcriptOTTRNOG000000014074140008363-1416956392014-07-15new
Cul1protein_codingOTTRNOG000000014054141883553-1419517102014-07-15new
Rn50_14_1004.2processed_pseudogeneOTTRNOG0000000140414100364394-1003651862014-07-14new
C1dprotein_codingOTTRNOG0000000140314100112222-1001237402014-07-14new
Plekprotein_codingOTTRNOG0000000140214100319964-1003868392014-07-14new
Cnrip1protein_codingOTTRNOG0000000140114100291061-1003205882014-07-14new
Rn50_14_1003.1processed_pseudogeneOTTRNOG0000000140014100277835-1002780542014-07-14new
Ppp3r1protein_codingOTTRNOG0000000139914100178529-1002273612014-07-14new
Rn50_14_1002.4processed_transcriptOTTRNOG0000000139814100146206-1001973542014-07-14new
Wdr92protein_codingOTTRNOG0000000139714100145263-1001662792014-07-14new
Pno1protein_codingOTTRNOG0000000139614100166648-1001752182014-07-11new
Rn50_11_0160.1unprocessed_pseudogeneOTTRNOG000000013951115937672-159394352014-07-11new
Robo2protein_codingOTTRNOG000000013941114733696-152532572014-07-11new
Fgbprotein_codingOTTRNOG000000013932201441735-2014527982014-07-11new
Plrg1protein_codingOTTRNOG000000013882201454938-2014712932014-07-11new
Rragaprotein_codingOTTRNOG000000013875108928873-1089304692014-07-10new
Fam154aprotein_codingOTTRNOG000000013865108757126-1089087132014-07-10new
Rn50_5_1085.1TECOTTRNOG000000013855108442603-1084440632014-07-10new
Adamtsl1protein_codingOTTRNOG000000013845108355488-1087395972014-07-10new
Luzp2processed_transcriptOTTRNOG000000013811114425911-1145350472014-07-08new
Rn50_1_1144.1processed_pseudogeneOTTRNOG000000013801114355345-1143563262014-07-08new
Rn50_1_1141.1processed_pseudogeneOTTRNOG000000013791114031989-1140325982014-07-08new
Gabrb3protein_codingOTTRNOG000000013771113984812-1142750432014-07-08new
Sipa1l1protein_codingOTTRNOG000000013766114193905-1143046342014-08-04new
Rn50_6_1087.2processed_pseudogeneOTTRNOG000000013756108661275-1086617642014-07-04new
Tex21protein_codingOTTRNOG000000013746108648678-1086853062014-07-04new
Esr2protein_codingOTTRNOG000000013736108576431-1086261272014-07-04new
Sgpp1protein_codingOTTRNOG000000013726108093015-1081138432014-07-04new
Syne2processed_transcriptOTTRNOG000000013716108261351-1085656252014-07-04new
Rn50_1_0430.2processed_transcriptOTTRNOG00000001370142934747-429354342014-07-02new
Rn50_1_0427.1processed_transcriptOTTRNOG00000001369142668519-426691342014-07-02new
Rn50_1_0435.2processed_transcriptOTTRNOG00000001368143462639-434637052014-07-02new
Myct1protein_codingOTTRNOG00000001367143450967-434608782014-07-02new
Esr1protein_codingOTTRNOG00000001366142534457-429328392014-07-02new
Syne1processed_transcriptOTTRNOG00000001363142947994-434068662014-07-02new
Rn50_12_0174.1processed_pseudogeneOTTRNOG000000013621217359662-173606672014-06-30new
Rn50_12_0174.2processed_pseudogeneOTTRNOG000000013611217223547-172245862014-06-30new
Rn50_12_0168.1processed_pseudogeneOTTRNOG000000013601216757980-167585212014-06-30new
Sdk1processed_transcriptOTTRNOG000000013591216473582-174553662014-06-30new
Dmdprotein_codingOTTRNOG00000001358X51475980-537000212014-06-30new
Mlphprotein_codingOTTRNOG00000001356997753779-977895902014-06-27new
Col6a3processed_transcriptOTTRNOG00000001355997607499-976852642014-06-27new
Rn50_9_0975.2processed_transcriptOTTRNOG00000001354997466041-974668592014-06-27new
Cops8protein_codingOTTRNOG00000001353997453665-974635482014-06-27new
Evi5lprotein_codingOTTRNOG00000001352124740785-47792042014-06-27new
Ivns1abpprotein_codingOTTRNOG000000013491373665199-736848512014-06-26new
Ankrd6protein_codingOTTRNOG00000001348552640128-527782722014-06-26new
Rn50_5_0525.3processed_pseudogeneOTTRNOG00000001347552447975-524484112014-06-26new
Rn50_5_0525.2processed_transcriptOTTRNOG00000001346552432790-524469682014-06-26new
Casp8ap2protein_codingOTTRNOG00000001345552451857-524891662014-06-26new
Rn50_1_2133.1protein_codingOTTRNOG000000013441213272097-2133627842014-06-25new
Dclk2protein_codingOTTRNOG000000013422205515417-2056435052014-06-25new
Rn50_2_2049.2processed_pseudogeneOTTRNOG000000013402204838241-2048385092014-06-25new
Rn50_2_2049.3processed_transcriptOTTRNOG000000013392204828548-2048293642014-06-25new
Rps3aprotein_codingOTTRNOG000000013382204831066-2048356722014-06-25new
Mab21l2protein_codingOTTRNOG000000013372205249634-2052521612014-06-25new
Rn50_2_2053.2processed_pseudogeneOTTRNOG000000013362205203245-2052042082014-06-25new
Lrbaprotein_codingOTTRNOG000000013352204923845-2055092882014-06-25new
Rn50_9_0737.3processed_transcriptOTTRNOG00000001332973616411-736201092014-06-24new
Unc80protein_codingOTTRNOG00000001330973619817-738073242014-06-24new
Rpeprotein_codingOTTRNOG00000001329973595046-736150742014-06-23new
Rn50_2_1476.1processed_transcriptOTTRNOG000000013282147517622-1475494282014-06-23new
Larp1bprotein_codingOTTRNOG000000013252147446540-1474782442014-06-23new
Mis18bp1protein_codingOTTRNOG00000001324696368850-964131102014-06-20new
Rn50_6_0964.4TECOTTRNOG00000001323696301907-963029462014-06-20new
Fkbp3protein_codingOTTRNOG00000001322696299788-963110732014-06-20new
Rn50_6_0964.2protein_codingOTTRNOG00000001321696312667-963656122014-06-20new
E2f3protein_codingOTTRNOG000000013191737642308-377162472014-06-19new
Hus1bprotein_codingOTTRNOG000000013181738707196-387082892014-06-19new
Rn50_17_0387.1processed_pseudogeneOTTRNOG000000013171738689347-386898222014-06-19new
Exoc2protein_codingOTTRNOG000000013161738561708-387360142014-06-19new
Irf4protein_codingOTTRNOG000000013151738500425-385141412014-06-19new
Rn50_17_0383.1unprocessed_pseudogeneOTTRNOG000000013141738210427-382195622014-06-19new
Gpr50protein_codingOTTRNOG000000013131738076056-380806422014-06-19new
Rn50_17_0381.1processed_pseudogeneOTTRNOG000000013121738017599-380182502014-06-19new
Rn50_17_0380.2protein_codingOTTRNOG000000013111737994478-379989062014-06-19new
Cdkal1processed_transcriptOTTRNOG000000013101737759276-391660272014-06-19new
Cmtr2protein_codingOTTRNOG000000013091952256007-522618492014-06-18new
Rn50_19_0521.1processed_pseudogeneOTTRNOG000000013081952034819-520351822014-06-18new
Vac14protein_codingOTTRNOG000000013071951753772-518559712014-06-18new
Dpydprotein_codingOTTRNOG000000013012239874410-2407440422014-06-17new
Igsf10protein_codingOTTRNOG000000013002168965527-1689962812014-06-17new
P2ry12protein_codingOTTRNOG000000012992168873853-1688768032014-06-17new
P2ry13protein_codingOTTRNOG000000012982168848414-1688496662014-06-17new
Gpr87protein_codingOTTRNOG000000012972168817067-1688353312014-06-17new
P2ry14protein_codingOTTRNOG000000012962168750896-1687667442014-06-17new
Med12lprotein_codingOTTRNOG000000012952168632573-1689646682014-06-17new
Wsb2protein_codingOTTRNOG000000012941246762961-467831742014-06-16new
Rfc5protein_codingOTTRNOG000000012931246752012-467618422014-06-16new
Rn50_12_0468.1processed_pseudogeneOTTRNOG000000012921246711208-467114742014-06-16new
Ksr2protein_codingOTTRNOG000000012911246360194-467318102014-06-16new
Cnga3protein_codingOTTRNOG00000001290943453325-434973662014-06-16new
Vwa3bprocessed_transcriptOTTRNOG00000001289943259833-434252152014-06-16new
Rn50_3_0730.2processed_transcriptOTTRNOG00000001287372963673-729971412014-06-13new
Rn50_3_0729.2processed_pseudogeneOTTRNOG00000001286372857428-728581332014-06-13new
Itga4protein_codingOTTRNOG00000001285372754421-728254882014-06-13new
Neurod1protein_codingOTTRNOG00000001284372974870-729783032014-06-13new
Cerklprotein_codingOTTRNOG00000001283372830454-729552532014-06-13new
Tmem132bprotein_codingOTTRNOG000000012821237852456-382714022014-06-13new
Hoxa5protein_codingOTTRNOG000000012814146837218-1468400382014-06-13new
Atl2protein_codingOTTRNOG0000000128062548683-25901302014-06-12new
Rn50_6_0026.1processed_pseudogeneOTTRNOG0000000127962536545-25373372014-06-12new
Cyp1b1protein_codingOTTRNOG0000000127862291772-23006442014-06-12new
Rmdn2protein_codingOTTRNOG0000000127762200625-22646142014-06-12new
Rnf217protein_codingOTTRNOG00000001276129757083-298461132014-06-12new
Nkain2protein_codingOTTRNOG00000001275128929718-296133102014-06-12new
Rn50_4_2149.1processed_pseudogeneOTTRNOG000000012744214887767-2148887122014-06-12new
Rbm31yprotein_codingOTTRNOG00000001273X97939943-979418922014-06-12new
Rn50_6_0565.1processed_pseudogeneOTTRNOG00000001272656426090-564270042014-06-12new
Rn50_3_1169.1processed_pseudogeneOTTRNOG000000012713116802647-1168034482014-06-12new
Rn50_5_0437.1processed_pseudogeneOTTRNOG00000001270543610492-436113502014-06-12new
Akr1b1protein_codingOTTRNOG00000001269461426188-614402762014-06-12new
Rn50_3_1832.1processed_pseudogeneOTTRNOG000000012683183153478-1831542432014-06-12new
Rn50_9_0040.1protein_codingOTTRNOG0000000126793908728-39419872014-06-12new
Sult1c2protein_codingOTTRNOG0000000126693693359-37255782014-06-11new
Sult1c2aprotein_codingOTTRNOG0000000126593191456-32070882014-06-11new
Rn50_9_0039.1protein_codingOTTRNOG0000000126493859877-38762782014-06-11new
Rn50_9_0034.1protein_codingOTTRNOG0000000126393308021-33196552014-06-11new
Rn50_9_0032.1protein_codingOTTRNOG0000000126293110962-31538412014-06-11new
Rn50_7_0058.1processed_pseudogeneOTTRNOG0000000126175736041-57369762014-06-11new
Rn50_7_0063.2processed_pseudogeneOTTRNOG0000000126076272421-62733562014-06-11new
Rn50_7_0063.1processed_pseudogeneOTTRNOG0000000125976264624-62655322014-06-11new
Rn50_4_1469.2protein_codingOTTRNOG000000012584146952771-1469565032014-06-11new
Rn50_4_1469.1protein_codingOTTRNOG000000012574146866976-1468767642014-06-11new
C4bprotein_codingOTTRNOG00000001256206381700-63960712014-06-10new
Rn50_20_0048.1protein_codingOTTRNOG00000001255204754468-47810102014-08-20new
C4aprotein_codingOTTRNOG00000001254206575264-65880132014-06-10new
Apoc1protein_codingOTTRNOG00000001253181872116-818753992014-06-10new
Spnprotein_codingOTTRNOG000000012521205563659-2055678862014-06-10new
Rn50_12_0203.1protein_codingOTTRNOG000000012511220280049-202911892014-06-10new
Rn50_12_0203.2protein_codingOTTRNOG000000012501220269884-202745742014-06-10new
Rn50_12_0203.3protein_codingOTTRNOG000000012491220257706-202626632014-06-10new
Rn50_12_0203.4processed_pseudogeneOTTRNOG000000012481220241836-202428122014-06-10new
Bola2protein_codingOTTRNOG000000012471205099098-2051001572014-06-10new
Rn50_12_0009.1processed_pseudogeneOTTRNOG0000000124612872144-8724012014-06-10new
Rn50_8_0587.1processed_pseudogeneOTTRNOG00000001245858677306-586775632014-06-10new
Sdccag3protein_codingOTTRNOG0000000124439188726-91954382014-06-10new
Rn50_2_1434.1protein_codingOTTRNOG000000011022143170181-1433803912014-06-20updated