Transcript: si:rp71-45g20.11-004 OTTDART00000022150.2

Description

novel protein similar to vertebrate retinoblastoma binding protein 6 (RBBP6)

Location

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt
si:rp71-45g20.11-002	OTTDART00000022148.2	1040	265aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	A8WHX8
si:rp71-45g20.11-001	OTTDART00000022130.1	1008	173aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	A8WHX5
si:rp71-45g20.11-004	OTTDART00000022150.2	865	82aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	E9QCK1
si:rp71-45g20.11-007	OTTDART00000022153.1	531	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
si:rp71-45g20.11-003	OTTDART00000022149.2	1208	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
si:rp71-45g20.11-005	OTTDART00000022151.2	671	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
si:rp71-45g20.11-006	OTTDART00000022152.1	626	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Loading component

Statistics

Exons: 6 Transcript length: 865 bps Translation length: 82 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/10/2014 (Created on 22/03/2006)

Alternative symbols

RP71-45G20.11-004

Other assemblies

This transcript maps to 27,959,148-27,960,589 in GRCz10 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000141360

Curation Method

Manual annotation from Havana