Transcript: usf1-008 OTTDART00000029686.1

Description

upstream transcription factor 1

Location

Chromosome 15: 21,316,854-21,322,592 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTDARG00000022885 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
usf1-001	OTTDART00000029679.1	1492	309aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F1QUA1
usf1-006	OTTDART00000029684.3	931	266aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E9QBR1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-007	OTTDART00000029685.1	838	237aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E9QBT6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-010	OTTDART00000029688.1	832	230aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F1QQW3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
usf1-003	OTTDART00000029681.2	805	224aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E9QFD0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-008	OTTDART00000029686.1	765	213aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E9QEC7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-009	OTTDART00000029687.1	710	205aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E9QFN2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-004	OTTDART00000029682.2	579	156aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-005	OTTDART00000029683.2	402	90aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
usf1-002	OTTDART00000029680.2	1450	228aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	E9QIH8

Summary

Loading component

Statistics

Exons: 9 Transcript length: 765 bps Translation length: 213 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/07/2015 (Created on 13/02/2007)

Alternative symbols

DKEY-105H12.1-008

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 21,316,854-21,322,592 in GRCz10 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000143990

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: usf1-008 OTTDART00000029686.1

Summary

Transcript-based displays