Transcript: si:ch1073-335m2.2-002 OTTDART00000039785.3

Description

novel protein similar to H.sapiens SPEN, spen homolog, transcriptional regulator (Drosophila) (SPEN)

Location

Chromosome 22: 157,682-161,567 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTDARG00000029035 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
si:ch1073-335m2.2-001	OTTDART00000039784.2	2135	691aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	B8K0C7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
si:ch1073-335m2.2-002	OTTDART00000039785.3	1628	457aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F1R7Z5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
si:ch1073-335m2.2-003	OTTDART00000039786.1	1256	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Loading component

Statistics

Exons: 5 Transcript length: 1,628 bps Translation length: 457 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/10/2014 (Created on 27/08/2008)

Alternative symbols

CH1073-335M2.3-001

CH1073-335M2.2-002

Remarks

gene fragments CH1073-335M2.3-001 and CH1073-335M2.2-001 are part of the same gene; the exact exon structure linking the fragments is yet to be determined

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 157,682-161,567 in GRCz10 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000138707

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: si:ch1073-335m2.2-002 OTTDART00000039785.3

Summary

Transcript-based displays