Transcript: srrm1-002 OTTDART00000055512.1

Description

serine/arginine repetitive matrix 1

Location

Chromosome 17: 25,407,722-25,410,182 forward strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTDARG00000038724 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
srrm1-001	OTTDART00000055511.1	3517	896aa	OTTDARP00000043539	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F8W2E1
srrm1-008	OTTDART00000055518.2	3480	929aa	OTTDARP00000043543	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E7F1X7
srrm1-007	OTTDART00000055517.2	848	283aa	OTTDARP00000043542	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
srrm1-003	OTTDART00000055513.1	889	79aa	OTTDARP00000043540	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	F8W2X4
srrm1-005	OTTDART00000055515.2	803	238aa	OTTDARP00000043541	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	F8W280
srrm1-006	OTTDART00000055516.1	834	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
srrm1-004	OTTDART00000055514.1	612	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
srrm1-002	OTTDART00000055512.1	567	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 3 Transcript length: 567 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/10/2014 (Created on 03/02/2012)

Alternative symbols

CH73-93N8.3-002

Other assemblies

This transcript maps to 25,407,722-25,410,182 in GRCz10 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000149747

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: srrm1-002 OTTDART00000055512.1

Summary

Transcript-based displays