Transcript: srrm1-003 OTTDART00000055513.1

Description

serine/arginine repetitive matrix 1

Location

Chromosome 17: 25,407,722-25,414,345 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTDARG00000038724 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
srrm1-001	OTTDART00000055511.1	3517	896aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F8W2E1
srrm1-008	OTTDART00000055518.2	3480	929aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E7F1X7
srrm1-007	OTTDART00000055517.2	848	283aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
srrm1-003	OTTDART00000055513.1	889	79aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	F8W2X4
srrm1-005	OTTDART00000055515.2	803	238aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	F8W280
srrm1-006	OTTDART00000055516.1	834	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
srrm1-004	OTTDART00000055514.1	612	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
srrm1-002	OTTDART00000055512.1	567	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Loading component

Statistics

Exons: 8 Transcript length: 889 bps Translation length: 79 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/10/2014 (Created on 03/02/2012)

Alternative symbols

CH73-93N8.3-003

Other assemblies

This transcript maps to 25,407,722-25,414,345 in GRCz10 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000148856

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: srrm1-003 OTTDART00000055513.1

Summary

Transcript-based displays