Transcript: cadps2-001 OTTDART00000056644.1

Description

Ca++-dependent secretion activator 2

Location

Chromosome 25: 27,715,150-27,826,751 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTDARG00000022438 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
cadps2-001	OTTDART00000056644.1	2572	629aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	K7DY62	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
cadps2-002	OTTDART00000056643.1	1811	483aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	K7DYJ7
cadps2-003	OTTDART00000028881.2	1618	396aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F1RCG6
cadps2-004	OTTDART00000056647.2	769	165aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	R4GEI2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
cadps2-005	OTTDART00000056645.1	539	106aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	K7DYF3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
cadps2-006	OTTDART00000056646.1	758	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Loading component

Statistics

Exons: 16 Transcript length: 2,572 bps Translation length: 629 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/10/2014 (Created on 08/06/2012)

Alternative symbols

CH211-245M13.2-001

DKEY-1P18.3-001

Remarks

gene fragments DKEY-1P18.3-001 and CH211-245M13.2-001 are part of the same gene; the exact exon structure linking the fragments is yet to be determined

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 27,715,150-27,826,751 in GRCz10 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000151854

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: cadps2-001 OTTDART00000056644.1

Summary

Transcript-based displays