Transcript: ptp4a1-006 OTTDART00000062648.2

Description

protein tyrosine phosphatase type IVA, member 1

Location

Chromosome 11: 11,284,287-11,288,826 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTDARG00000034922 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
ptp4a1-001	OTTDART00000049585.2	2002	173aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	F1QSC9
ptp4a1-006	OTTDART00000062648.2	821	80aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ptp4a1-004	OTTDART00000060782.1	727	164aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	E7FA71	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ptp4a1-003	OTTDART00000055785.2	135	44aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	K7DYB3
ptp4a1-002	OTTDART00000049586.2	1109	184aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	F8W283
ptp4a1-005	OTTDART00000060781.1	806	201aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	A0A0R4IXJ0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ptp4a1-007	OTTDART00000062647.1	942	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Loading component

Statistics

Exons: 4 Transcript length: 821 bps Translation length: 80 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 13/01/2015)

Alternative symbols

DKEY-23F9.1-006

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 11,284,287-11,288,826 in GRCz10 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSDART00000173346

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: ptp4a1-006 OTTDART00000062648.2

Summary

Transcript-based displays