Description
guanylate binding protein 3
Synonyms
FLJ10961
Location
Chromosome 1: 89,006,666-89,022,894 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 12 transcripts (splice variants), 9 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GBP3-008 | OTTHUMT00000313541.3 | 3067 | 595aa | OTTHUMP00000194787 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS717 | Q9H0R5 | |
| GBP3-007 | OTTHUMT00000097592.2 | 702 | 218aa | OTTHUMP00000249599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BNS1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GBP3-010 | OTTHUMT00000421172.2 | 599 | 123aa | OTTHUMP00000249641 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BPH2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GBP3-006 | OTTHUMT00000029296.2 | 411 | 137aa | OTTHUMP00000012356 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5T8M0 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| GBP3-001 | OTTHUMT00000029291.3 | 2936 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| GBP3-003 | OTTHUMT00000029293.3 | 2561 | 91aa | OTTHUMP00000012355 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BRX6 | |
| GBP3-005 | OTTHUMT00000029295.5 | 2455 | 290aa | OTTHUMP00000249598 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6X827 | |
| GBP3-002 | OTTHUMT00000029292.4 | 2062 | 142aa | OTTHUMP00000012354 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6SPX6 | |
| GBP3-012 | OTTHUMT00000421173.1 | 583 | 96aa | OTTHUMP00000249642 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BP53 | |
| GBP3-004 | OTTHUMT00000029294.2 | 566 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GBP3-009 | OTTHUMT00000421169.1 | 3678 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GBP3-011 | OTTHUMT00000421174.1 | 512 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
