This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: SS18L1 OTTHUMG00000032902

.

Description

synovial sarcoma translocation gene on chromosome 18-like 1

Synonyms

KIAA0693, CREST

Location

Chromosome 20: 62,143,795-62,182,484 forward strand.

VEGA68:CM000682.2

About this gene

This gene has 4 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SS18L1-003	OTTHUMT00000080004.2	4493	396aa	OTTHUMP00000031468	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13491	O75177
SS18L1-004	OTTHUMT00000080005.3	781	128aa	OTTHUMP00000031469	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SS18L1-001	OTTHUMT00000080002.4	899	211aa	OTTHUMP00000031467	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SS18L1-002	OTTHUMT00000080003.1	456	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

.

Summary

.

.

Gene-based displays