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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SHH OTTHUMG00000151349

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Description

sonic hedgehog homolog (Drosophila)

Synonyms

TPTPS, MCOPCB5, HHG1, TPT, SMMCI

Location

Chromosome 7: 155,799,986-155,812,273 reverse strand.

VEGA68:CM000669.2

About this gene

This gene has 5 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SHH-001	OTTHUMT00000322327.1	4454	462aa	OTTHUMP00000199886	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5942	Q15465
SHH-003	OTTHUMT00000322329.2	677	169aa	OTTHUMP00000199887	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JC48	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SHH-005	OTTHUMT00000322331.1	888	126aa	OTTHUMP00000199889	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WB84
SHH-004	OTTHUMT00000322330.1	807	123aa	OTTHUMP00000199888	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WEH4
SHH-002	OTTHUMT00000322328.1	504	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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