Description
SH3 and multiple ankyrin repeat domains 2
Synonyms
SPANK-3, ProSAP1, CTTNBP1, SHANK
Location
Chromosome 11: 70,467,856-71,252,577 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 22 transcripts (splice variants), 4 orthologues and 1 paralogue.
Transcripts
Show/hide columns (1 hidden)
- Name
- Transcript ID
- bp
- Protein
- Translation ID
- Biotype
- CCDS
- UniProt
- Flags
| Name | Transcript ID | bp | Protein | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|
| SHANK2-024 | OTTHUMT00000477858.2 | 7271 | 1261aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS76448 | A6NHU9 | |
| SHANK2-001 | OTTHUMT00000259184.2 | 9208 | 1253aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q9UPX8 | |
| SHANK2-005 | OTTHUMT00000259333.4 | 9062 | 1849aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A6NHU9 | |
| SHANK2-003 | OTTHUMT00000259279.1 | 6821 | 1128aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHANK2-008 | OTTHUMT00000259337.2 | 2123 | 281aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SHANK2-016 | OTTHUMT00000327651.1 | 1376 | 257aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHANK2-023 | OTTHUMT00000477860.1 | 939 | 271aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SHANK2-012 | OTTHUMT00000327647.3 | 635 | 212aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SHANK2-018 | OTTHUMT00000327653.2 | 557 | 186aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SHANK2-019 | OTTHUMT00000327654.2 | 460 | 153aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SHANK2-026 | OTTHUMT00000477861.1 | 434 | 108aa | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHANK2-022 | OTTHUMT00000477859.1 | 7884 | No protein | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SHANK2-015 | OTTHUMT00000327650.1 | 843 | No protein | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SHANK2-017 | OTTHUMT00000327652.1 | 487 | No protein | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SHANK2-004 | OTTHUMT00000259280.2 | 2775 | 74aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHANK2-010 | OTTHUMT00000259336.2 | 1879 | 126aa | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SHANK2-020 | OTTHUMT00000327655.1 | 762 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SHANK2-014 | OTTHUMT00000327649.1 | 736 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SHANK2-021 | OTTHUMT00000472573.1 | 522 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SHANK2-007 | OTTHUMT00000259335.1 | 510 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SHANK2-011 | OTTHUMT00000327646.1 | 381 | No protein | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SHANK2-025 | OTTHUMT00000477857.1 | 5738 | No protein | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
Showing 1 to 22 of 22 entries
