Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
Synonyms
Rsc6p, CRACD3, BAF60C
Location
Chromosome 7: 151,238,764-151,277,896 reverse strand.
VEGA68:CM000669.2
About this gene
This gene has 15 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMARCD3-001 | OTTHUMT00000348824.1 | 2018 | 470aa | OTTHUMP00000212163 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5924 | - | |
| SMARCD3-002 | OTTHUMT00000348825.1 | 1993 | 483aa | OTTHUMP00000212164 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34780 | Q6STE5 | |
| SMARCD3-008 | OTTHUMT00000348831.7 | 613 | 139aa | OTTHUMP00000212166 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCD3-003 | OTTHUMT00000348826.1 | 2219 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SMARCD3-004 | OTTHUMT00000348827.1 | 2415 | 73aa | OTTHUMP00000212165 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMARCD3-011 | OTTHUMT00000348834.1 | 820 | 68aa | OTTHUMP00000212167 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMARCD3-009 | OTTHUMT00000348832.1 | 802 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMARCD3-010 | OTTHUMT00000348833.1 | 673 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMARCD3-015 | OTTHUMT00000348838.1 | 468 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMARCD3-013 | OTTHUMT00000348836.1 | 378 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMARCD3-007 | OTTHUMT00000348830.1 | 1755 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD3-005 | OTTHUMT00000348828.1 | 1654 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD3-006 | OTTHUMT00000348829.1 | 1480 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD3-014 | OTTHUMT00000348837.1 | 863 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD3-012 | OTTHUMT00000348835.1 | 798 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
