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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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Gene: COL6A5 OTTHUMG00000159712

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Description

collagen, type VI, alpha 5

Synonyms

VWA4, FLJ35880

Location

Chromosome 3: 130,345,516-130,484,844 forward strand.

VEGA68:CM000665.2

About this gene

This gene has 4 transcripts (splice variants), 10 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL6A5-003	OTTHUMT00000357220.2	3138	778aa	OTTHUMP00000216412	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-002	OTTHUMT00000357013.2	1780	443aa	OTTHUMP00000216988	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-004	OTTHUMT00000357221.1	1770	557aa	OTTHUMP00000216413	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-001	OTTHUMT00000357014.1	9226	2615aa	OTTHUMP00000216291	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A8TX70

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Summary

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