Description
lectin, galactoside-binding, soluble, 9
Synonyms
LGALS9A
Location
Chromosome 17: 27,629,798-27,649,560 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 16 transcripts (splice variants), 7 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LGALS9-001 | OTTHUMT00000255583.1 | 3114 | 355aa | OTTHUMP00000163272 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11222 | O00182 | |
| LGALS9-002 | OTTHUMT00000255584.1 | 3018 | 323aa | OTTHUMP00000163273 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32592 | A0A024QZ02 | |
| LGALS9-005 | OTTHUMT00000255587.1 | 1378 | 246aa | OTTHUMP00000163275 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82093 | - | |
| LGALS9-014 | OTTHUMT00000448421.1 | 754 | 137aa | OTTHUMP00000262551 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KSA0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LGALS9-010 | OTTHUMT00000445269.3 | 598 | 175aa | OTTHUMP00000261018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KS82 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LGALS9-015 | OTTHUMT00000448419.3 | 594 | 115aa | OTTHUMP00000264162 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EPS0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LGALS9-016 | OTTHUMT00000448422.2 | 377 | 125aa | OTTHUMP00000262552 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QS92 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| LGALS9-003 | OTTHUMT00000255585.3 | 1512 | 75aa | OTTHUMP00000260925 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QKK6 | |
| LGALS9-008 | OTTHUMT00000445267.2 | 851 | 75aa | OTTHUMP00000260924 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QKK6 | |
| LGALS9-004 | OTTHUMT00000255586.2 | 449 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LGALS9-006 | OTTHUMT00000255588.2 | 2951 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LGALS9-007 | OTTHUMT00000255589.1 | 2349 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LGALS9-013 | OTTHUMT00000448420.1 | 712 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LGALS9-011 | OTTHUMT00000445268.12 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LGALS9-009 | OTTHUMT00000445270.1 | 556 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LGALS9-012 | OTTHUMT00000445271.1 | 555 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
