Description
histocompatibility (minor) HA-1
Location
Chromosome 19: 1,065,923-1,086,628 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
HMHA1-002 | OTTHUMT00000458026.2 | 4273 | 1136aa | OTTHUMP00000267711 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32863 | Q92619 | |
HMHA1-001 | OTTHUMT00000458024.2 | 4184 | 1152aa | OTTHUMP00000267710 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58637 | - | |
HMHA1-007 | OTTHUMT00000458031.2 | 4120 | 1140aa | OTTHUMP00000268034 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82263 | K7ES98 | |
HMHA1-004 | OTTHUMT00000458032.2 | 3750 | 1019aa | OTTHUMP00000268035 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74242 | F5H1R4 | |
HMHA1-005 | OTTHUMT00000458035.2 | 3218 | 771aa | OTTHUMP00000267714 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74243 | K7ES92 | |
HMHA1-003 | OTTHUMT00000458029.2 | 4191 | 1163aa | OTTHUMP00000267713 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EM85 | |
HMHA1-010 | OTTHUMT00000458025.3 | 539 | 170aa | OTTHUMP00000268033 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HMHA1-008 | OTTHUMT00000458030.2 | 3351 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HMHA1-006 | OTTHUMT00000458027.3 | 3875 | 60aa | OTTHUMP00000267712 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HMHA1-012 | OTTHUMT00000458040.2 | 1284 | 78aa | OTTHUMP00000274785 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087X1A3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HMHA1-016 | OTTHUMT00000458037.1 | 551 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HMHA1-013 | OTTHUMT00000458033.3 | 442 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HMHA1-009 | OTTHUMT00000458039.1 | 1563 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HMHA1-017 | OTTHUMT00000458038.2 | 940 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HMHA1-011 | OTTHUMT00000458028.2 | 645 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HMHA1-015 | OTTHUMT00000458036.2 | 579 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HMHA1-014 | OTTHUMT00000458034.1 | 545 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |