Description
HMP19 protein
Location
Chromosome 5: 174,045,604-174,243,501 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 12 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HMP19-001 | OTTHUMT00000252966.2 | 2452 | 171aa | OTTHUMP00000161104 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4391 | Q9Y328 | |
| HMP19-012 | OTTHUMT00000373480.2 | 613 | 171aa | OTTHUMP00000223952 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4391 | Q9Y328 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HMP19-002 | OTTHUMT00000371792.3 | 1260 | 99aa | OTTHUMP00000223203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RH73 | |
| HMP19-010 | OTTHUMT00000373478.2 | 643 | 145aa | OTTHUMP00000223950 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RHS6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HMP19-011 | OTTHUMT00000373479.2 | 568 | 158aa | OTTHUMP00000223951 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RGE8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HMP19-004 | OTTHUMT00000373472.1 | 1334 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HMP19-003 | OTTHUMT00000373471.1 | 1317 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HMP19-005 | OTTHUMT00000373473.2 | 984 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HMP19-009 | OTTHUMT00000373477.1 | 603 | 94aa | OTTHUMP00000223949 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3XAM5 | |
| HMP19-006 | OTTHUMT00000373474.1 | 1403 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HMP19-007 | OTTHUMT00000373475.1 | 1258 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HMP19-008 | OTTHUMT00000373476.1 | 533 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
