Description
U2 snRNP-associated SURP domain containing
Synonyms
SR140, fSAPa
Location
Chromosome 3: 142,964,497-143,060,546 forward strand.
VEGA68:CM000665.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| U2SURP-001 | OTTHUMT00000354603.2 | 7276 | 1029aa | OTTHUMP00000214847 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46928 | O15042 | |
| U2SURP-022 | OTTHUMT00000369898.1 | 3491 | 1028aa | OTTHUMP00000222446 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ET15 | |
| U2SURP-019 | OTTHUMT00000354861.1 | 1267 | 290aa | OTTHUMP00000215005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| U2SURP-008 | OTTHUMT00000461808.3 | 725 | 125aa | OTTHUMP00000273438 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| U2SURP-006 | OTTHUMT00000354608.2 | 588 | 161aa | OTTHUMP00000214850 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| U2SURP-007 | OTTHUMT00000354609.2 | 571 | 130aa | OTTHUMP00000214851 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| U2SURP-004 | OTTHUMT00000354606.2 | 4364 | 439aa | OTTHUMP00000214848 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0Y8D9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| U2SURP-002 | OTTHUMT00000354604.2 | 3557 | 425aa | OTTHUMP00000224527 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EW00 | |
| U2SURP-010 | OTTHUMT00000354612.1 | 470 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| U2SURP-005 | OTTHUMT00000354607.1 | 2855 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-003 | OTTHUMT00000354605.2 | 1580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-014 | OTTHUMT00000354616.2 | 1182 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-009 | OTTHUMT00000354611.1 | 881 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-012 | OTTHUMT00000354614.2 | 866 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-011 | OTTHUMT00000354613.1 | 824 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-018 | OTTHUMT00000354860.1 | 556 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2SURP-017 | OTTHUMT00000354859.1 | 540 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
