Description
PTPRF interacting protein, binding protein 2 (liprin beta 2)
Synonyms
Cclp1
Location
Chromosome 11: 7,513,298-7,657,127 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 29 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PPFIBP2-001 | OTTHUMT00000385345.2 | 3557 | 876aa | OTTHUMP00000230467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31419 | Q8ND30 | |
| PPFIBP2-008 | OTTHUMT00000385403.2 | 2965 | 733aa | OTTHUMP00000230498 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58117 | - | |
| PPFIBP2-007 | OTTHUMT00000385402.1 | 2580 | 764aa | OTTHUMP00000230497 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58116 | - | |
| PPFIBP2-003 | OTTHUMT00000385398.1 | 3003 | 718aa | OTTHUMP00000230496 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PPFIBP2-012 | OTTHUMT00000385589.1 | 814 | 89aa | OTTHUMP00000230616 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-015 | OTTHUMT00000385592.2 | 780 | 155aa | OTTHUMP00000230619 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-022 | OTTHUMT00000385598.2 | 673 | 225aa | OTTHUMP00000230621 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PPFIBP2-013 | OTTHUMT00000385590.2 | 625 | 170aa | OTTHUMP00000230617 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-017 | OTTHUMT00000385593.2 | 577 | 86aa | OTTHUMP00000230620 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-028 | OTTHUMT00000385605.2 | 562 | 149aa | OTTHUMP00000230623 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PPFIBP2-023 | OTTHUMT00000385600.2 | 545 | 181aa | OTTHUMP00000230622 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PPFIBP2-014 | OTTHUMT00000385591.2 | 534 | 70aa | OTTHUMP00000230618 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-011 | OTTHUMT00000385588.2 | 484 | 89aa | OTTHUMP00000230615 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PPFIBP2-029 | OTTHUMT00000392952.2 | 407 | 136aa | OTTHUMP00000235052 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PPFIBP2-006 | OTTHUMT00000385401.1 | 2399 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PPFIBP2-005 | OTTHUMT00000385400.1 | 1955 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PPFIBP2-002 | OTTHUMT00000385372.2 | 1488 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PPFIBP2-009 | OTTHUMT00000385404.1 | 2042 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PPFIBP2-004 | OTTHUMT00000385399.1 | 1597 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PPFIBP2-016 | OTTHUMT00000385594.1 | 602 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PPFIBP2-027 | OTTHUMT00000385602.1 | 561 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PPFIBP2-010 | OTTHUMT00000385405.1 | 1841 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-018 | OTTHUMT00000385595.1 | 1059 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-024 | OTTHUMT00000385601.1 | 817 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-021 | OTTHUMT00000385599.1 | 769 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-025 | OTTHUMT00000385603.1 | 568 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-020 | OTTHUMT00000385597.1 | 538 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-019 | OTTHUMT00000385596.1 | 320 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PPFIBP2-026 | OTTHUMT00000385604.1 | 308 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
