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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (6)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: NPTX1 OTTHUMG00000177607

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Description

neuronal pentraxin I

Location

Chromosome 17: 80,466,835-80,477,843 reverse strand.

VEGA68:CM000679.2

About this gene

This gene has 5 transcripts (splice variants), 6 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NPTX1-001	OTTHUMT00000438051.1	5122	432aa	OTTHUMP00000257225	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32762	Q15818
NPTX1-003	OTTHUMT00000438049.1	6177	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
NPTX1-004	OTTHUMT00000438053.1	472	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NPTX1-002	OTTHUMT00000438050.1	3957	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NPTX1-005	OTTHUMT00000438052.1	556	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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