Description
nicalin
Synonyms
NET59, NICALIN
Location
Chromosome 19: 3,185,563-3,209,575 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 9 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NCLN-001 | OTTHUMT00000452545.1 | 4005 | 563aa | OTTHUMP00000264961 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32869 | Q969V3 | |
| NCLN-002 | OTTHUMT00000452549.1 | 2735 | 282aa | OTTHUMP00000264964 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ELZ9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NCLN-005 | OTTHUMT00000452544.1 | 2070 | 489aa | OTTHUMP00000264960 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMW4 | |
| NCLN-006 | OTTHUMT00000452546.2 | 1080 | 328aa | OTTHUMP00000264962 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ENM2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NCLN-008 | OTTHUMT00000452551.1 | 380 | 72aa | OTTHUMP00000264965 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EN96 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NCLN-003 | OTTHUMT00000452547.1 | 3446 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NCLN-004 | OTTHUMT00000452548.1 | 1210 | 350aa | OTTHUMP00000264963 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0C4DGP7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NCLN-007 | OTTHUMT00000452550.2 | 836 | 110aa | OTTHUMP00000265356 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NCLN-009 | OTTHUMT00000452783.1 | 460 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
