Transcript: UPF2-001 OTTHUMT00000046783.1

Description

UPF2 regulator of nonsense transcripts homolog (yeast)

Location

About this transcript

This transcript has 21 exons and is annotated with 26 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
UPF2-001	OTTHUMT00000046783.1	5569	1272aa	OTTHUMP00000019091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7086	Q9HAU5
UPF2-002	OTTHUMT00000046784.1	5193	1272aa	OTTHUMP00000019092	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7086	Q9HAU5
UPF2-003	OTTHUMT00000046785.2	2851	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
UPF2-004	OTTHUMT00000046786.1	640	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 21 Transcript length: 5,569 bps Translation length: 1,272 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7086

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 03/06/2003)

Alternative symbols

RP11-401F24.2-001

Remarks

alternative 5' UTR

alternatively spliced 5' UTR, shares CDS with bA401F24.4.2

alternatively spliced 5' UTR, shares CDS with bA796C22.1.2

alternatively spliced 5' UTR, shares CDS with Em:AC073160.1.2

UPF2 regulator of nonsense transcripts homolog (yeast)

Other assemblies

This transcript maps to 11,920,022-12,035,897 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000356352

Curation Method

Manual annotation from Havana