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Description

collagen, type XXVII, alpha 1

About this transcript

This transcript has 58 exons and is annotated with 16 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
COL27A1-001OTTHUMT00000053763.177901860aaOTTHUMP00000021970
 
Protein coding
CCDS6802Q8IZC6
COL27A1-004OTTHUMT00000053766.12865714aaOTTHUMP00000021972
 
Protein coding
--CDS 5' incomplete
COL27A1-002OTTHUMT00000053764.35329485aaOTTHUMP00000233716
 
Nonsense mediated decay
--CDS 5' incomplete
COL27A1-006OTTHUMT00000315894.23991No protein-
 
Processed transcript
--
COL27A1-003OTTHUMT00000053765.21946No protein-
 
Processed transcript
--
COL27A1-008OTTHUMT00000315896.1666No protein-
 
Processed transcript
--
COL27A1-007OTTHUMT00000315895.1514No protein-
 
Processed transcript
--
COL27A1-005OTTHUMT00000315893.1463No protein-
 
Retained intron
--
Statistics

Exons: 58 Transcript length: 5,329 bps Translation length: 485 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 24/03/2003)

Alternative symbols

RP11-82I1.1-002

Remarks

novel transcript

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 114,168,608-114,311,548 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays