Description
PDZ and LIM domain 7 (enigma)
Location
Chromosome 5: 177,483,397-177,497,601 reverse strand.
About this transcript
This transcript has 11 exons.
Gene
This transcript is a product of gene OTTHUMG00000130853 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PDLIM7-001 | OTTHUMT00000253423.1 | 1689 | 457aa | OTTHUMP00000161442 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4422 | Q9NR12 | |
| PDLIM7-003 | OTTHUMT00000253425.1 | 1567 | 423aa | OTTHUMP00000161444 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4423 | - | |
| PDLIM7-004 | OTTHUMT00000253426.1 | 977 | 222aa | OTTHUMP00000161445 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4424 | - | |
| PDLIM7-007 | OTTHUMT00000280610.1 | 1226 | 287aa | OTTHUMP00000180646 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PDLIM7-015 | OTTHUMT00000373196.2 | 931 | 287aa | OTTHUMP00000223833 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM7-009 | OTTHUMT00000373190.2 | 759 | 173aa | OTTHUMP00000223829 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM7-012 | OTTHUMT00000373193.3 | 671 | 195aa | OTTHUMP00000223831 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM7-010 | OTTHUMT00000373191.2 | 636 | 90aa | OTTHUMP00000223830 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM7-005 | OTTHUMT00000280608.3 | 2300 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PDLIM7-006 | OTTHUMT00000280609.4 | 1904 | 191aa | OTTHUMP00000237030 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PDLIM7-002 | OTTHUMT00000253424.3 | 1686 | 153aa | OTTHUMP00000161443 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PDLIM7-013 | OTTHUMT00000373194.3 | 451 | 120aa | OTTHUMP00000223832 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDLIM7-016 | OTTHUMT00000373197.1 | 405 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDLIM7-008 | OTTHUMT00000280611.1 | 1015 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDLIM7-011 | OTTHUMT00000373192.3 | 669 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDLIM7-014 | OTTHUMT00000373195.1 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDLIM7-017 | OTTHUMT00000373198.1 | 556 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
