Transcript: NT5C1B-004 OTTHUMT00000323824.3

Description

5'-nucleotidase, cytosolic IB

Location

Chromosome 2: 18,562,932-18,589,572 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000151765 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NT5C1B-001	OTTHUMT00000323821.1	2678	550aa	OTTHUMP00000200494	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33149	-
NT5C1B-002	OTTHUMT00000323822.1	2475	610aa	OTTHUMP00000200495	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33150	A0A140VJC7
NT5C1B-006	OTTHUMT00000323827.1	914	265aa	OTTHUMP00000200499	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZQ4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
NT5C1B-008	OTTHUMT00000323828.2	685	205aa	OTTHUMP00000200500	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
NT5C1B-004	OTTHUMT00000323824.3	2554	203aa	OTTHUMP00000200497	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
NT5C1B-009	OTTHUMT00000323829.2	561	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NT5C1B-005	OTTHUMT00000323825.1	1768	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,554 bps Translation length: 203 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 27/02/2014 (Created on 24/01/2008)

Alternative symbols

AC079148.2-004

Remarks

non canonical TEC

Other assemblies

This transcript maps to 18,562,932-18,589,572 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000406971

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: NT5C1B-004 OTTHUMT00000323824.3

Summary

Transcript-based displays