Transcript: CACNA2D3-006 OTTHUMT00000351407.2

Description

calcium channel, voltage-dependent, alpha 2/delta subunit 3

Location

Chromosome 3: 54,177,796-54,562,915 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000158580 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CACNA2D3-001	OTTHUMT00000351402.1	3675	1091aa	OTTHUMP00000213118	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54598	Q8IZS8
CACNA2D3-002	OTTHUMT00000351403.2	3557	997aa	OTTHUMP00000213119	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
CACNA2D3-006	OTTHUMT00000351407.2	559	126aa	OTTHUMP00000213123	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CACNA2D3-003	OTTHUMT00000351404.1	3477	519aa	OTTHUMP00000213120	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CACNA2D3-004	OTTHUMT00000351405.1	1972	525aa	OTTHUMP00000213121	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CACNA2D3-005	OTTHUMT00000351406.1	1826	46aa	OTTHUMP00000213122	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CACNA2D3-009	OTTHUMT00000351410.1	760	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CACNA2D3-007	OTTHUMT00000351408.1	495	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CACNA2D3-008	OTTHUMT00000351409.1	740	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 559 bps Translation length: 126 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 08/04/2009)

Alternative symbols

RP11-96N5.1-006

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 54,177,796-54,562,915 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000492460

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CACNA2D3-006 OTTHUMT00000351407.2

Summary

Transcript-based displays