Transcript: PRICKLE2-006 OTTHUMT00000491593.1

Description

prickle homolog 2 (Drosophila)

Location

Chromosome 3: 64,160,057-64,445,245 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000158789 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRICKLE2-001	OTTHUMT00000352219.2	9956	844aa	OTTHUMP00000213482	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2902	A0A024R368
PRICKLE2-002	OTTHUMT00000352237.3	8032	844aa	OTTHUMP00000213496	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2902	C9JY03
PRICKLE2-003	OTTHUMT00000431928.2	7918	900aa	OTTHUMP00000254244	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BNU0
PRICKLE2-006	OTTHUMT00000491593.1	428	143aa	OTTHUMP00000283324	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PRICKLE2-004	OTTHUMT00000431929.2	538	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PRICKLE2-005	OTTHUMT00000491589.1	4446	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRICKLE2-009	OTTHUMT00000491591.1	4151	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRICKLE2-008	OTTHUMT00000491590.1	3704	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRICKLE2-007	OTTHUMT00000491592.1	587	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 428 bps Translation length: 143 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/05/2016 (Created on 23/05/2016)

Alternative symbols

RP11-129B22.3-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 64,160,057-64,445,245 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000498162

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PRICKLE2-006 OTTHUMT00000491593.1

Summary

Transcript-based displays