Transcript: AGPAT6-003 OTTHUMT00000377160.3

Description

1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)

Location

Chromosome 8: 41,578,415-41,599,226 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000164082 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AGPAT6-001	OTTHUMT00000377158.1	6298	456aa	OTTHUMP00000225814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6117	Q86UL3
AGPAT6-003	OTTHUMT00000377160.3	1101	29aa	OTTHUMP00000225816	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RGW3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
AGPAT6-006	OTTHUMT00000377159.2	768	158aa	OTTHUMP00000225815	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RIA1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
AGPAT6-007	OTTHUMT00000377162.2	873	179aa	OTTHUMP00000226421	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E5RHA6
AGPAT6-004	OTTHUMT00000377157.1	870	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AGPAT6-002	OTTHUMT00000377156.1	572	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AGPAT6-005	OTTHUMT00000377161.1	520	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AGPAT6-010	OTTHUMT00000377165.1	1063	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AGPAT6-011	OTTHUMT00000378211.1	997	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AGPAT6-009	OTTHUMT00000377164.1	842	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AGPAT6-008	OTTHUMT00000377163.2	664	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 1,101 bps Translation length: 29 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 18/08/2015 (Created on 23/02/2010)

Alternative symbols

RP11-360L9.5-003

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 41,578,415-41,599,226 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000520223

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AGPAT6-003 OTTHUMT00000377160.3

Summary

Transcript-based displays