Transcript: LPXN-005 OTTHUMT00000394892.1

Description

leupaxin

Location

About this transcript

This transcript has 10 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
LPXN-003	OTTHUMT00000394710.1	1879	391aa	OTTHUMP00000235993	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53635	-
LPXN-002	OTTHUMT00000394709.1	1833	386aa	OTTHUMP00000235992	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7969	O60711
LPXN-001	OTTHUMT00000394711.2	1751	366aa	OTTHUMP00000257179	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76407	B7Z5P7
LPXN-004	OTTHUMT00000394712.2	1379	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LPXN-005	OTTHUMT00000394892.1	2099	106aa	OTTHUMP00000236082	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LPXN-006	OTTHUMT00000394893.1	515	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,099 bps Translation length: 106 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 25/08/2010)

Alternative symbols

RP11-655C2.2-005

Other assemblies

This transcript maps to 58,526,871-58,575,836 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000530561

Curation Method

Manual annotation from Havana